Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_00618 | VFPBJ_05346 | A0A179H7F3 | A0A179HFQ0 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.933 |
PCL_00618 | VFPBJ_05449 | A0A179H7F3 | A0A179GPQ5 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase. | 0.996 |
PCL_00618 | VFPBJ_07149 | A0A179H7F3 | A0A179HUU8 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.962 |
PCL_00618 | VFPBJ_09289 | A0A179H7F3 | A0A179GUG4 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate--cysteine ligase. | 0.803 |
PCL_00618 | VFPBJ_10476 | A0A179H7F3 | A0A179HT88 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate decarboxylase. | 0.931 |
PCL_00618 | VFPBJ_10978 | A0A179H7F3 | A0A179FQL5 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.962 |
PCL_00618 | VFPFJ_01422 | A0A179H7F3 | A0A179HZJ0 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate decarboxylase. | 0.931 |
PCL_00618 | VFPFJ_07549 | A0A179H7F3 | A0A179H6G6 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 5-oxoprolinase. | 0.818 |
PCL_00618 | VFPFJ_09431 | A0A179H7F3 | A0A179GSS3 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate-cysteine ligase regulatory subunit. | 0.803 |
VFPBJ_05346 | PCL_00618 | A0A179HFQ0 | A0A179H7F3 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.933 |
VFPBJ_05346 | VFPBJ_05449 | A0A179HFQ0 | A0A179GPQ5 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate synthase. | 0.909 |
VFPBJ_05346 | VFPBJ_07149 | A0A179HFQ0 | A0A179HUU8 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.962 |
VFPBJ_05346 | VFPBJ_09289 | A0A179HFQ0 | A0A179GUG4 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate--cysteine ligase. | 0.800 |
VFPBJ_05346 | VFPBJ_10476 | A0A179HFQ0 | A0A179HT88 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate decarboxylase. | 0.900 |
VFPBJ_05346 | VFPBJ_10978 | A0A179HFQ0 | A0A179FQL5 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamine synthetase; Belongs to the glutamine synthetase family. | 0.906 |
VFPBJ_05346 | VFPFJ_01422 | A0A179HFQ0 | A0A179HZJ0 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate decarboxylase. | 0.900 |
VFPBJ_05346 | VFPFJ_07549 | A0A179HFQ0 | A0A179H6G6 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 5-oxoprolinase. | 0.801 |
VFPBJ_05346 | VFPFJ_09431 | A0A179HFQ0 | A0A179GSS3 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Glutamate-cysteine ligase regulatory subunit. | 0.804 |
VFPBJ_05449 | PCL_00618 | A0A179GPQ5 | A0A179H7F3 | Glutamate synthase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.996 |
VFPBJ_05449 | VFPBJ_05346 | A0A179GPQ5 | A0A179HFQ0 | Glutamate synthase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.909 |
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