Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_03207 | PCL_03209 | A0A179HFP6 | A0A179GQQ4 | ATP-citrate synthase subunit 1. | ATP-citrate-lyase. | 0.999 |
PCL_03207 | VFPBJ_01858 | A0A179HFP6 | A0A179HC72 | ATP-citrate synthase subunit 1. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.489 |
PCL_03207 | VFPBJ_07567 | A0A179HFP6 | A0A179H6S7 | ATP-citrate synthase subunit 1. | Hybrid NRPS/PKS enzyme. | 0.408 |
PCL_03209 | PCL_03207 | A0A179GQQ4 | A0A179HFP6 | ATP-citrate-lyase. | ATP-citrate synthase subunit 1. | 0.999 |
PCL_03209 | VFPBJ_01858 | A0A179GQQ4 | A0A179HC72 | ATP-citrate-lyase. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.489 |
PCL_03209 | VFPBJ_07567 | A0A179GQQ4 | A0A179H6S7 | ATP-citrate-lyase. | Hybrid NRPS/PKS enzyme. | 0.408 |
VFPBJ_01858 | PCL_03207 | A0A179HC72 | A0A179HFP6 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | ATP-citrate synthase subunit 1. | 0.489 |
VFPBJ_01858 | PCL_03209 | A0A179HC72 | A0A179GQQ4 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | ATP-citrate-lyase. | 0.489 |
VFPBJ_01858 | VFPBJ_07567 | A0A179HC72 | A0A179H6S7 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Hybrid NRPS/PKS enzyme. | 0.432 |
VFPBJ_07567 | PCL_03207 | A0A179H6S7 | A0A179HFP6 | Hybrid NRPS/PKS enzyme. | ATP-citrate synthase subunit 1. | 0.408 |
VFPBJ_07567 | PCL_03209 | A0A179H6S7 | A0A179GQQ4 | Hybrid NRPS/PKS enzyme. | ATP-citrate-lyase. | 0.408 |
VFPBJ_07567 | VFPBJ_01858 | A0A179H6S7 | A0A179HC72 | Hybrid NRPS/PKS enzyme. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.432 |
VFPBJ_07567 | VFPFJ_02952 | A0A179H6S7 | A0A179HWN7 | Hybrid NRPS/PKS enzyme. | Nonribosomal peptide synthase. | 0.506 |
VFPBJ_07567 | VFPFJ_04539 | A0A179H6S7 | A0A179HLM7 | Hybrid NRPS/PKS enzyme. | Nonribosomal peptide synthase. | 0.456 |
VFPBJ_07567 | VFPFJ_07063 | A0A179H6S7 | A0A179HG53 | Hybrid NRPS/PKS enzyme. | Acetyl-CoA synthetase-like protein. | 0.697 |
VFPBJ_07567 | VFPFJ_09663 | A0A179H6S7 | A0A179GUP3 | Hybrid NRPS/PKS enzyme. | Amino acid adenylation domain-containing protein. | 0.474 |
VFPBJ_07567 | VFPFJ_09694 | A0A179H6S7 | A0A179GVR8 | Hybrid NRPS/PKS enzyme. | Thioesterase family protein. | 0.451 |
VFPBJ_07567 | VFPFJ_10289 | A0A179H6S7 | A0A179GJD4 | Hybrid NRPS/PKS enzyme. | Antibiotic synthetase. | 0.651 |
VFPFJ_02952 | VFPBJ_07567 | A0A179HWN7 | A0A179H6S7 | Nonribosomal peptide synthase. | Hybrid NRPS/PKS enzyme. | 0.506 |
VFPFJ_04539 | VFPBJ_07567 | A0A179HLM7 | A0A179H6S7 | Nonribosomal peptide synthase. | Hybrid NRPS/PKS enzyme. | 0.456 |
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