STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_07960MTS domain-containing protein. (456 aa)    
Predicted Functional Partners:
PCL_05144
Adomet-dependent trna methyltransferase complex subunit.
    
 0.949
VFPFJ_04375
Peptide chain release factor 1.
  
 
 0.941
VFPBJ_07885
ATP-dependent metallopeptidase HflB.
      0.810
VFPFJ_07818
Leucyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.796
VFPBJ_03273
Eukaryotic peptide chain release factor subunit 1.
    
 0.753
PCL_03036
Coproporphyrinogen III oxidase.
   
 
 0.698
PCL_13003
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.688
VFPBJ_06739
Cytidine and deoxycytidylate deaminase zinc-binding region.
     
 0.648
PCL_07630
N(5)-glutamine methyltransferase MTQ2.
      
 0.619
PCL_03544
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.611
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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