Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_01280 | VFPBJ_00627 | A0A179HQR2 | A0A179H8Z3 | Transcription factor bzip protein. | Eukaryotic translation initiation factor 5A. | 0.956 |
PCL_01280 | VFPBJ_00793 | A0A179HQR2 | A0A179HZ64 | Transcription factor bzip protein. | Cullin-1; Belongs to the cullin family. | 0.581 |
PCL_01280 | VFPBJ_06723 | A0A179HQR2 | A0A179HT55 | Transcription factor bzip protein. | Ubiquitin. | 0.850 |
PCL_01280 | VFPFJ_01598 | A0A179HQR2 | A0A179I140 | Transcription factor bzip protein. | Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. | 0.877 |
PCL_01280 | VFPFJ_04134 | A0A179HQR2 | A0A179HQX1 | Transcription factor bzip protein. | Ubiquitin-protein ligase Ufd4. | 0.848 |
PCL_01280 | VFPFJ_05246 | A0A179HQR2 | A0A179HLA5 | Transcription factor bzip protein. | SCF ubiquitin ligase subunit CulC; Belongs to the cullin family. | 0.581 |
PCL_01280 | VFPFJ_08162 | A0A179HQR2 | A0A179H8C7 | Transcription factor bzip protein. | Ubiquitin-conjugating enzyme, E2. | 0.843 |
PCL_10925 | VFPBJ_00627 | A0A179HTT2 | A0A179H8Z3 | Ubiquitin. | Eukaryotic translation initiation factor 5A. | 0.957 |
PCL_10925 | VFPBJ_00793 | A0A179HTT2 | A0A179HZ64 | Ubiquitin. | Cullin-1; Belongs to the cullin family. | 0.581 |
PCL_10925 | VFPBJ_06723 | A0A179HTT2 | A0A179HT55 | Ubiquitin. | Ubiquitin. | 0.984 |
PCL_10925 | VFPFJ_01598 | A0A179HTT2 | A0A179I140 | Ubiquitin. | Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. | 0.877 |
PCL_10925 | VFPFJ_04134 | A0A179HTT2 | A0A179HQX1 | Ubiquitin. | Ubiquitin-protein ligase Ufd4. | 0.848 |
PCL_10925 | VFPFJ_05246 | A0A179HTT2 | A0A179HLA5 | Ubiquitin. | SCF ubiquitin ligase subunit CulC; Belongs to the cullin family. | 0.581 |
PCL_10925 | VFPFJ_08162 | A0A179HTT2 | A0A179H8C7 | Ubiquitin. | Ubiquitin-conjugating enzyme, E2. | 0.843 |
VFPBJ_00627 | PCL_01280 | A0A179H8Z3 | A0A179HQR2 | Eukaryotic translation initiation factor 5A. | Transcription factor bzip protein. | 0.956 |
VFPBJ_00627 | PCL_10925 | A0A179H8Z3 | A0A179HTT2 | Eukaryotic translation initiation factor 5A. | Ubiquitin. | 0.957 |
VFPBJ_00627 | VFPBJ_00793 | A0A179H8Z3 | A0A179HZ64 | Eukaryotic translation initiation factor 5A. | Cullin-1; Belongs to the cullin family. | 0.758 |
VFPBJ_00627 | VFPBJ_04881 | A0A179H8Z3 | A0A179HPS0 | Eukaryotic translation initiation factor 5A. | Complex I intermediate-associated protein 30. | 0.956 |
VFPBJ_00627 | VFPBJ_06723 | A0A179H8Z3 | A0A179HT55 | Eukaryotic translation initiation factor 5A. | Ubiquitin. | 0.997 |
VFPBJ_00627 | VFPFJ_01598 | A0A179H8Z3 | A0A179I140 | Eukaryotic translation initiation factor 5A. | Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. | 0.985 |
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