STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPBJ_004772-dehydropantoate 2-reductase. (771 aa)    
Predicted Functional Partners:
VFPFJ_09391
RNase3 domain-containingprotein.
   
 0.991
VFPBJ_10237
Nucleoporin NUP49/NSP49.
   
 0.983
VFPFJ_03260
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.741
VFPFJ_05000
mRNA export factor mex67.
   
 0.708
VFPFJ_01261
Nuclear pore complex subunit.
   
 0.699
VFPBJ_05445
Nuclear pore protein (Nic96).
   
 0.693
VFPBJ_01859
Nuclear pore complex subunit; Belongs to the WD repeat SEC13 family.
    
 0.691
VFPFJ_01475
Non-repetitive nucleoporin.
   
 0.681
VFPBJ_02378
Poly(A)+ RNA export protein.
    
 0.661
VFPFJ_05218
Nuclear pore complex subunit.
   
 0.656
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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