Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_00725 | PCL_07521 | A0A179H8G6 | A0A179H1S9 | Ferredoxin. | Methylenetetrahydrofolate dehydrogenase. | 0.410 |
PCL_00725 | VFPBJ_00593 | A0A179H8G6 | A0A179HAM5 | Ferredoxin. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.994 |
PCL_00725 | VFPBJ_05449 | A0A179H8G6 | A0A179GPQ5 | Ferredoxin. | Glutamate synthase. | 0.692 |
PCL_00725 | VFPBJ_08352 | A0A179H8G6 | A0A179GDV4 | Ferredoxin. | Nitrate reductase. | 0.814 |
PCL_00725 | VFPBJ_10246 | A0A179H8G6 | A0A179GC17 | Ferredoxin. | Sulfite reductase beta subunit. | 0.713 |
PCL_07521 | PCL_00725 | A0A179H1S9 | A0A179H8G6 | Methylenetetrahydrofolate dehydrogenase. | Ferredoxin. | 0.410 |
PCL_07521 | VFPBJ_00593 | A0A179H1S9 | A0A179HAM5 | Methylenetetrahydrofolate dehydrogenase. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.808 |
PCL_07521 | VFPBJ_03309 | A0A179H1S9 | A0A179HFB3 | Methylenetetrahydrofolate dehydrogenase. | Glutamate 5-kinase. | 0.606 |
PCL_07521 | VFPFJ_10479 | A0A179H1S9 | A0A179GGI9 | Methylenetetrahydrofolate dehydrogenase. | Beta-lactamase-like protein. | 0.410 |
VFPBJ_00593 | PCL_00725 | A0A179HAM5 | A0A179H8G6 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Ferredoxin. | 0.994 |
VFPBJ_00593 | PCL_07521 | A0A179HAM5 | A0A179H1S9 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Methylenetetrahydrofolate dehydrogenase. | 0.808 |
VFPBJ_00593 | VFPBJ_03309 | A0A179HAM5 | A0A179HFB3 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Glutamate 5-kinase. | 0.810 |
VFPBJ_00593 | VFPBJ_05449 | A0A179HAM5 | A0A179GPQ5 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Glutamate synthase. | 0.999 |
VFPBJ_00593 | VFPBJ_08352 | A0A179HAM5 | A0A179GDV4 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Nitrate reductase. | 0.806 |
VFPBJ_00593 | VFPBJ_10246 | A0A179HAM5 | A0A179GC17 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Sulfite reductase beta subunit. | 0.849 |
VFPBJ_00593 | VFPFJ_00768 | A0A179HAM5 | A0A179HZ04 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Electron transfer flavoprotein beta-subunit. | 0.856 |
VFPBJ_00593 | VFPFJ_06507 | A0A179HAM5 | A0A179HJD0 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Dihydroorotate dehydrogenase. | 0.844 |
VFPBJ_00593 | VFPFJ_09532 | A0A179HAM5 | A0A179GT19 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Dihydroorotate dehydrogenase-like protein. | 0.844 |
VFPBJ_00593 | VFPFJ_10479 | A0A179HAM5 | A0A179GGI9 | NADPH:adrenodoxin oxidoreductase, mitochondrial. | Beta-lactamase-like protein. | 0.926 |
VFPBJ_03309 | PCL_07521 | A0A179HFB3 | A0A179H1S9 | Glutamate 5-kinase. | Methylenetetrahydrofolate dehydrogenase. | 0.606 |
page 1 of 3