STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_07091Chromosome segregation ATPase family protein. (1914 aa)    
Predicted Functional Partners:
VFPBJ_05555
Mitochondrial carrier protein YHM1/SHM1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.688
PCL_07756
Uncharacterized protein.
  
     0.506
VFPFJ_08508
Dim2-associated protein 1, variant 1.
  
     0.488
PCL_05853
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
  
     0.468
VFPFJ_02975
Endosomal SPRY domain-containingprotein.
  
     0.450
VFPFJ_03831
Uncharacterized protein.
  
     0.449
VFPBJ_04542
Uncharacterized protein.
  
     0.444
PCL_09133
Deacetylase complex subunit Sds3.
  
     0.404
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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