STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_06833BTB/POZ fold domain-containing protein. (527 aa)    
Predicted Functional Partners:
VFPBJ_05814
Activator 1 subunit 3.
 
      0.832
PCL_01690
Palmitoyltransferase ERF2; Belongs to the GST superfamily.
 
      0.784
VFPFJ_07231
Ankyrin repeat protein nuc-2.
    
 
 0.764
VFPFJ_05728
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.583
PCL_01851
DNA ligase.
    
 0.439
VFPFJ_08035
ATP dependent DNA ligase domain-containingprotein.
    
 0.439
VFPFJ_07142
Cyclin dependent kinase (Pho85).
    
 
 0.421
VFPFJ_11456
Nodulation protein L.
    
   0.410
VFPBJ_10035
C6 zinc finger domain-containing protein.
    
   0.410
VFPBJ_08894
Phytanoyl-CoA dioxygenase family protein.
    
   0.410
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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