STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_07328DNA repair protein Rad14. (381 aa)    
Predicted Functional Partners:
VFPFJ_04886
DNA repair helicase RAD3.
    
 0.976
VFPFJ_00499
DNA repair protein RAD1.
    
 0.973
VFPFJ_04108
Mating-type switching protein swi10.
    
 0.972
PCL_08100
DNA repair helicase RAD25.
    
 0.965
PCL_04850
RNA polymerase II transcription factor B subunit 1.
    
 0.944
VFPBJ_08473
Transcription elongation factor S-II, central domain-containingprotein.
    
 0.942
PCL_06005
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.933
VFPFJ_09074
DNA excision repair protein (Rad2).
    
 0.927
VFPFJ_03505
DNA repair protein Mus81.
    
 0.925
VFPFJ_01035
DNA-directed RNA polymerase I subunit RPA1.
    
 0.918
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.