Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_09897 | VFPFJ_05968 | A0A179GQE3 | A0A179HHP2 | Alcohol dehydrogenase. | Pirin domain-containingprotein; Belongs to the pirin family. | 0.634 |
VFPBJ_01266 | VFPFJ_05968 | A0A179HAB5 | A0A179HHP2 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Pirin domain-containingprotein; Belongs to the pirin family. | 0.500 |
VFPBJ_07505 | VFPFJ_05968 | A0A179H963 | A0A179HHP2 | Alcohol dehydrogenase. | Pirin domain-containingprotein; Belongs to the pirin family. | 0.875 |
VFPFJ_05966 | VFPFJ_05968 | A0A179HI09 | A0A179HHP2 | Uncharacterized protein. | Pirin domain-containingprotein; Belongs to the pirin family. | 0.666 |
VFPFJ_05968 | PCL_09897 | A0A179HHP2 | A0A179GQE3 | Pirin domain-containingprotein; Belongs to the pirin family. | Alcohol dehydrogenase. | 0.634 |
VFPFJ_05968 | VFPBJ_01266 | A0A179HHP2 | A0A179HAB5 | Pirin domain-containingprotein; Belongs to the pirin family. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.500 |
VFPFJ_05968 | VFPBJ_07505 | A0A179HHP2 | A0A179H963 | Pirin domain-containingprotein; Belongs to the pirin family. | Alcohol dehydrogenase. | 0.875 |
VFPFJ_05968 | VFPFJ_05966 | A0A179HHP2 | A0A179HI09 | Pirin domain-containingprotein; Belongs to the pirin family. | Uncharacterized protein. | 0.666 |