STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_05560Pinin/SDK/MemA protein. (314 aa)    
Predicted Functional Partners:
VFPBJ_00742
SAP domain-containingprotein.
   
 0.940
VFPFJ_03549
Pwi domain mrna processing protein.
   
 0.890
PCL_04460
Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.
    
 0.875
PCL_00902
Mago nashi protein.
   
 0.821
PCL_06538
RNA recognition motif domain-containingprotein.
   
 0.800
PCL_11134
Uncharacterized protein.
   
 0.791
VFPFJ_04194
U1 snrnp splicing complex subunit.
   
   0.774
VFPBJ_05524
Nonsense-mediated mRNA decay protein Upf3.
   
 
 0.770
PCL_10015
RNA recognition motif domain-containingprotein.
    
 0.756
VFPFJ_03080
Serine/threonine-protein kinase prp4.
   
 0.696
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.