Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_00255 | VFPFJ_06493 | A0A179HX13 | A0A179HKT1 | Alpha/beta-hydrolase. | Zinc-containing alcohol dehydrogenase. | 0.798 |
PCL_12638 | VFPFJ_06493 | A0A179GEB0 | A0A179HKT1 | GroES-like protein. | Zinc-containing alcohol dehydrogenase. | 0.475 |
VFPFJ_01099 | VFPFJ_06493 | A0A179I063 | A0A179HKT1 | GroES-like protein. | Zinc-containing alcohol dehydrogenase. | 0.412 |
VFPFJ_06493 | PCL_00255 | A0A179HKT1 | A0A179HX13 | Zinc-containing alcohol dehydrogenase. | Alpha/beta-hydrolase. | 0.798 |
VFPFJ_06493 | PCL_12638 | A0A179HKT1 | A0A179GEB0 | Zinc-containing alcohol dehydrogenase. | GroES-like protein. | 0.475 |
VFPFJ_06493 | VFPFJ_01099 | A0A179HKT1 | A0A179I063 | Zinc-containing alcohol dehydrogenase. | GroES-like protein. | 0.412 |
VFPFJ_06493 | VFPFJ_08236 | A0A179HKT1 | A0A179H6R6 | Zinc-containing alcohol dehydrogenase. | Zinc-binding oxidoreductase CipB. | 0.420 |
VFPFJ_08236 | VFPFJ_06493 | A0A179H6R6 | A0A179HKT1 | Zinc-binding oxidoreductase CipB. | Zinc-containing alcohol dehydrogenase. | 0.420 |