Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_02937 | VFPFJ_05195 | A0A179HM82 | A0A179HKU7 | Dynamin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | Taz1-interacting factor 1. | 0.965 |
VFPBJ_00845 | VFPBJ_01276 | A0A179HY10 | A0A179I0H4 | Serine/threonine-protein phosphatase. | Serine/threonine protein kinase (Pdd7p). | 0.915 |
VFPBJ_00845 | VFPBJ_02206 | A0A179HY10 | A0A179H166 | Serine/threonine-protein phosphatase. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.418 |
VFPBJ_00845 | VFPBJ_06833 | A0A179HY10 | A0A179GLP1 | Serine/threonine-protein phosphatase. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.901 |
VFPBJ_00845 | VFPFJ_00352 | A0A179HY10 | A0A179HY39 | Serine/threonine-protein phosphatase. | WD-repeat protein mip1. | 0.811 |
VFPBJ_00845 | VFPFJ_02564 | A0A179HY10 | A0A179HU27 | Serine/threonine-protein phosphatase. | Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family. | 0.856 |
VFPBJ_00845 | VFPFJ_05195 | A0A179HY10 | A0A179HKU7 | Serine/threonine-protein phosphatase. | Taz1-interacting factor 1. | 0.911 |
VFPBJ_00845 | VFPFJ_05465 | A0A179HY10 | A0A179HLL1 | Serine/threonine-protein phosphatase. | Uncharacterized protein. | 0.900 |
VFPBJ_01276 | VFPBJ_00845 | A0A179I0H4 | A0A179HY10 | Serine/threonine protein kinase (Pdd7p). | Serine/threonine-protein phosphatase. | 0.915 |
VFPBJ_01276 | VFPBJ_06833 | A0A179I0H4 | A0A179GLP1 | Serine/threonine protein kinase (Pdd7p). | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.999 |
VFPBJ_01276 | VFPBJ_07234 | A0A179I0H4 | A0A179HUX8 | Serine/threonine protein kinase (Pdd7p). | Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. | 0.998 |
VFPBJ_01276 | VFPFJ_00352 | A0A179I0H4 | A0A179HY39 | Serine/threonine protein kinase (Pdd7p). | WD-repeat protein mip1. | 0.984 |
VFPBJ_01276 | VFPFJ_02564 | A0A179I0H4 | A0A179HU27 | Serine/threonine protein kinase (Pdd7p). | Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family. | 0.997 |
VFPBJ_01276 | VFPFJ_05195 | A0A179I0H4 | A0A179HKU7 | Serine/threonine protein kinase (Pdd7p). | Taz1-interacting factor 1. | 0.994 |
VFPBJ_01276 | VFPFJ_05465 | A0A179I0H4 | A0A179HLL1 | Serine/threonine protein kinase (Pdd7p). | Uncharacterized protein. | 0.998 |
VFPBJ_02206 | VFPBJ_00845 | A0A179H166 | A0A179HY10 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Serine/threonine-protein phosphatase. | 0.418 |
VFPBJ_02206 | VFPFJ_05195 | A0A179H166 | A0A179HKU7 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Taz1-interacting factor 1. | 0.912 |
VFPBJ_02206 | VFPFJ_06728 | A0A179H166 | A0A179HFK3 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Actin; Belongs to the actin family. | 0.999 |
VFPBJ_06833 | VFPBJ_00845 | A0A179GLP1 | A0A179HY10 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Serine/threonine-protein phosphatase. | 0.901 |
VFPBJ_06833 | VFPBJ_01276 | A0A179GLP1 | A0A179I0H4 | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | Serine/threonine protein kinase (Pdd7p). | 0.999 |
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