Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_10295 | VFPBJ_04276 | A0A179H131 | A0A179GV98 | RNA polymerase II subunit A. | YTH domain-containing protein. | 0.940 |
PCL_10295 | VFPBJ_10238 | A0A179H131 | A0A179GC21 | RNA polymerase II subunit A. | Fip1 like protein. | 0.992 |
PCL_10295 | VFPFJ_03777 | A0A179H131 | A0A179HNY3 | RNA polymerase II subunit A. | mRNA cleavage factor complex component Pcf11. | 0.980 |
PCL_10295 | VFPFJ_05177 | A0A179H131 | A0A179HMW8 | RNA polymerase II subunit A. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.995 |
PCL_10295 | VFPFJ_05224 | A0A179H131 | A0A179HKY0 | RNA polymerase II subunit A. | DNA repair protein Pso2/Snm1. | 0.741 |
PCL_10295 | VFPFJ_09015 | A0A179H131 | A0A179GZH9 | RNA polymerase II subunit A. | mRNA 3'-end-processing protein yth-1. | 0.997 |
PCL_10295 | VFPFJ_10123 | A0A179H131 | A0A179GL58 | RNA polymerase II subunit A. | Protein CFT1. | 0.994 |
VFPBJ_04276 | PCL_10295 | A0A179GV98 | A0A179H131 | YTH domain-containing protein. | RNA polymerase II subunit A. | 0.940 |
VFPBJ_04276 | VFPBJ_10237 | A0A179GV98 | A0A179GAU7 | YTH domain-containing protein. | Nucleoporin NUP49/NSP49. | 0.946 |
VFPBJ_04276 | VFPBJ_10238 | A0A179GV98 | A0A179GC21 | YTH domain-containing protein. | Fip1 like protein. | 0.998 |
VFPBJ_04276 | VFPFJ_03777 | A0A179GV98 | A0A179HNY3 | YTH domain-containing protein. | mRNA cleavage factor complex component Pcf11. | 0.998 |
VFPBJ_04276 | VFPFJ_05177 | A0A179GV98 | A0A179HMW8 | YTH domain-containing protein. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.969 |
VFPBJ_04276 | VFPFJ_05224 | A0A179GV98 | A0A179HKY0 | YTH domain-containing protein. | DNA repair protein Pso2/Snm1. | 0.996 |
VFPBJ_04276 | VFPFJ_10123 | A0A179GV98 | A0A179GL58 | YTH domain-containing protein. | Protein CFT1. | 0.998 |
VFPBJ_10237 | VFPBJ_04276 | A0A179GAU7 | A0A179GV98 | Nucleoporin NUP49/NSP49. | YTH domain-containing protein. | 0.946 |
VFPBJ_10237 | VFPBJ_10238 | A0A179GAU7 | A0A179GC21 | Nucleoporin NUP49/NSP49. | Fip1 like protein. | 0.946 |
VFPBJ_10237 | VFPFJ_05177 | A0A179GAU7 | A0A179HMW8 | Nucleoporin NUP49/NSP49. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.946 |
VFPBJ_10237 | VFPFJ_05224 | A0A179GAU7 | A0A179HKY0 | Nucleoporin NUP49/NSP49. | DNA repair protein Pso2/Snm1. | 0.741 |
VFPBJ_10237 | VFPFJ_09015 | A0A179GAU7 | A0A179GZH9 | Nucleoporin NUP49/NSP49. | mRNA 3'-end-processing protein yth-1. | 0.946 |
VFPBJ_10237 | VFPFJ_10123 | A0A179GAU7 | A0A179GL58 | Nucleoporin NUP49/NSP49. | Protein CFT1. | 0.947 |
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