Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_03829 | VFPBJ_05641 | A0A179HW99 | A0A179GQ44 | Heat shock protein 82. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.681 |
PCL_03829 | VFPBJ_06652 | A0A179HW99 | A0A179HVZ8 | Heat shock protein 82. | Oxidoreductase. | 0.745 |
PCL_03829 | VFPBJ_07312 | A0A179HW99 | A0A179GPF6 | Heat shock protein 82. | Signal transduction response regulator, SKN7-like protein. | 0.865 |
PCL_03829 | VFPFJ_05163 | A0A179HW99 | A0A179HLX4 | Heat shock protein 82. | Actin-like ATPase domain-containing protein. | 0.650 |
PCL_03829 | VFPFJ_08243 | A0A179HW99 | A0A179H6S4 | Heat shock protein 82. | UBA/TS-N domain-containingprotein. | 0.569 |
PCL_03829 | VFPFJ_11367 | A0A179HW99 | A0A179FEJ1 | Heat shock protein 82. | HSF-type DNA-binding domain-containing protein. | 0.865 |
VFPBJ_01266 | VFPBJ_07312 | A0A179HAB5 | A0A179GPF6 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Signal transduction response regulator, SKN7-like protein. | 0.642 |
VFPBJ_01266 | VFPFJ_05163 | A0A179HAB5 | A0A179HLX4 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Actin-like ATPase domain-containing protein. | 0.652 |
VFPBJ_01266 | VFPFJ_11367 | A0A179HAB5 | A0A179FEJ1 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | HSF-type DNA-binding domain-containing protein. | 0.642 |
VFPBJ_05641 | PCL_03829 | A0A179GQ44 | A0A179HW99 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Heat shock protein 82. | 0.681 |
VFPBJ_05641 | VFPBJ_06652 | A0A179GQ44 | A0A179HVZ8 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Oxidoreductase. | 0.681 |
VFPBJ_05641 | VFPFJ_00738 | A0A179GQ44 | A0A179HYX3 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Hamartin. | 0.681 |
VFPBJ_05641 | VFPFJ_03632 | A0A179GQ44 | A0A179HPW2 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Fe-S protein assembly co-chaperone HscB. | 0.640 |
VFPBJ_05641 | VFPFJ_05163 | A0A179GQ44 | A0A179HLX4 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Actin-like ATPase domain-containing protein. | 0.716 |
VFPBJ_06652 | PCL_03829 | A0A179HVZ8 | A0A179HW99 | Oxidoreductase. | Heat shock protein 82. | 0.745 |
VFPBJ_06652 | VFPBJ_05641 | A0A179HVZ8 | A0A179GQ44 | Oxidoreductase. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.681 |
VFPBJ_06652 | VFPBJ_07312 | A0A179HVZ8 | A0A179GPF6 | Oxidoreductase. | Signal transduction response regulator, SKN7-like protein. | 0.865 |
VFPBJ_06652 | VFPFJ_05163 | A0A179HVZ8 | A0A179HLX4 | Oxidoreductase. | Actin-like ATPase domain-containing protein. | 0.650 |
VFPBJ_06652 | VFPFJ_08243 | A0A179HVZ8 | A0A179H6S4 | Oxidoreductase. | UBA/TS-N domain-containingprotein. | 0.569 |
VFPBJ_06652 | VFPFJ_11367 | A0A179HVZ8 | A0A179FEJ1 | Oxidoreductase. | HSF-type DNA-binding domain-containing protein. | 0.865 |
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