Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VFPBJ_01266 | VFPBJ_02683 | A0A179HAB5 | A0A179HML0 | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | Magnesium transporter ALR1. | 0.500 |
VFPBJ_02682 | VFPBJ_02683 | A0A179HM01 | A0A179HML0 | Zn-finger protein; Belongs to the small Tim family. | Magnesium transporter ALR1. | 0.404 |
VFPBJ_02683 | VFPBJ_01266 | A0A179HML0 | A0A179HAB5 | Magnesium transporter ALR1. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.500 |
VFPBJ_02683 | VFPBJ_02682 | A0A179HML0 | A0A179HM01 | Magnesium transporter ALR1. | Zn-finger protein; Belongs to the small Tim family. | 0.404 |
VFPBJ_02683 | VFPFJ_07759 | A0A179HML0 | A0A179H6Z9 | Magnesium transporter ALR1. | Calcium permeable channel. | 0.840 |
VFPFJ_07759 | VFPBJ_02683 | A0A179H6Z9 | A0A179HML0 | Calcium permeable channel. | Magnesium transporter ALR1. | 0.840 |