Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_01852 | VFPBJ_00582 | A0A179H0Q9 | A0A179H9D9 | Uracil phosphoribosyl transferase. | Uracil phosphoribosyltransferase. | 0.934 |
PCL_01852 | VFPFJ_03623 | A0A179H0Q9 | A0A179HRA4 | Uracil phosphoribosyl transferase. | Nucleoside hydrolase. | 0.929 |
PCL_01852 | VFPFJ_05080 | A0A179H0Q9 | A0A179HN01 | Uracil phosphoribosyl transferase. | IdgA domain-containingprotein. | 0.900 |
PCL_12689 | VFPBJ_09518 | A0A179HB46 | A0A179GCL3 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Ribokinase protein. | 0.908 |
PCL_12689 | VFPFJ_00973 | A0A179HB46 | A0A179HXX6 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | GRF zinc finger domain-containing protein. | 0.686 |
PCL_12689 | VFPFJ_03623 | A0A179HB46 | A0A179HRA4 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Nucleoside hydrolase. | 0.401 |
PCL_12689 | VFPFJ_05080 | A0A179HB46 | A0A179HN01 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | IdgA domain-containingprotein. | 0.554 |
PCL_12917 | VFPFJ_05080 | A0A179HB26 | A0A179HN01 | Zinc finger protein. | IdgA domain-containingprotein. | 0.554 |
VFPBJ_00582 | PCL_01852 | A0A179H9D9 | A0A179H0Q9 | Uracil phosphoribosyltransferase. | Uracil phosphoribosyl transferase. | 0.934 |
VFPBJ_00582 | VFPFJ_03623 | A0A179H9D9 | A0A179HRA4 | Uracil phosphoribosyltransferase. | Nucleoside hydrolase. | 0.945 |
VFPBJ_00582 | VFPFJ_05080 | A0A179H9D9 | A0A179HN01 | Uracil phosphoribosyltransferase. | IdgA domain-containingprotein. | 0.900 |
VFPBJ_03277 | VFPFJ_05080 | A0A179H4Y1 | A0A179HN01 | Adenosine kinase. | IdgA domain-containingprotein. | 0.554 |
VFPBJ_09518 | PCL_12689 | A0A179GCL3 | A0A179HB46 | Ribokinase protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.908 |
VFPBJ_09518 | VFPFJ_05080 | A0A179GCL3 | A0A179HN01 | Ribokinase protein. | IdgA domain-containingprotein. | 0.554 |
VFPFJ_00618 | VFPFJ_05080 | A0A179HYK1 | A0A179HN01 | MAK32-like protein. | IdgA domain-containingprotein. | 0.554 |
VFPFJ_00973 | PCL_12689 | A0A179HXX6 | A0A179HB46 | GRF zinc finger domain-containing protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.686 |
VFPFJ_00973 | VFPFJ_05080 | A0A179HXX6 | A0A179HN01 | GRF zinc finger domain-containing protein. | IdgA domain-containingprotein. | 0.554 |
VFPFJ_03623 | PCL_01852 | A0A179HRA4 | A0A179H0Q9 | Nucleoside hydrolase. | Uracil phosphoribosyl transferase. | 0.929 |
VFPFJ_03623 | PCL_12689 | A0A179HRA4 | A0A179HB46 | Nucleoside hydrolase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.401 |
VFPFJ_03623 | VFPBJ_00582 | A0A179HRA4 | A0A179H9D9 | Nucleoside hydrolase. | Uracil phosphoribosyltransferase. | 0.945 |
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