Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_03664 | PCL_07523 | A0A179GLA5 | A0A179HN77 | Nitrite reductase. | Nitrate/nitrite transporter. | 0.996 |
PCL_03664 | PCL_13074 | A0A179GLA5 | A0A179H8Y3 | Nitrite reductase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.983 |
PCL_03664 | VFPBJ_08352 | A0A179GLA5 | A0A179GDV4 | Nitrite reductase. | Nitrate reductase. | 0.976 |
PCL_03664 | VFPBJ_09562 | A0A179GLA5 | A0A179GEM7 | Nitrite reductase. | 2-nitropropane dioxygenase. | 0.900 |
PCL_03664 | VFPFJ_08658 | A0A179GLA5 | A0A179GY07 | Nitrite reductase. | 2-nitropropane dioxygenase. | 0.901 |
PCL_07523 | PCL_03664 | A0A179HN77 | A0A179GLA5 | Nitrate/nitrite transporter. | Nitrite reductase. | 0.996 |
PCL_07523 | PCL_13074 | A0A179HN77 | A0A179H8Y3 | Nitrate/nitrite transporter. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.987 |
PCL_07523 | VFPBJ_00698 | A0A179HN77 | A0A179HZ41 | Nitrate/nitrite transporter. | Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. | 0.660 |
PCL_07523 | VFPBJ_08352 | A0A179HN77 | A0A179GDV4 | Nitrate/nitrite transporter. | Nitrate reductase. | 0.968 |
PCL_07523 | VFPBJ_09562 | A0A179HN77 | A0A179GEM7 | Nitrate/nitrite transporter. | 2-nitropropane dioxygenase. | 0.902 |
PCL_07523 | VFPBJ_10246 | A0A179HN77 | A0A179GC17 | Nitrate/nitrite transporter. | Sulfite reductase beta subunit. | 0.659 |
PCL_07523 | VFPFJ_01499 | A0A179HN77 | A0A179I101 | Nitrate/nitrite transporter. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.638 |
PCL_07523 | VFPFJ_06019 | A0A179HN77 | A0A179HH05 | Nitrate/nitrite transporter. | Siroheme synthase. | 0.685 |
PCL_07523 | VFPFJ_08658 | A0A179HN77 | A0A179GY07 | Nitrate/nitrite transporter. | 2-nitropropane dioxygenase. | 0.900 |
PCL_07523 | VFPFJ_10016 | A0A179HN77 | A0A179GQ96 | Nitrate/nitrite transporter. | Cytochrome b5. | 0.644 |
PCL_13074 | PCL_03664 | A0A179H8Y3 | A0A179GLA5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrite reductase. | 0.983 |
PCL_13074 | PCL_07523 | A0A179H8Y3 | A0A179HN77 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate/nitrite transporter. | 0.987 |
PCL_13074 | VFPBJ_00698 | A0A179H8Y3 | A0A179HZ41 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. | 0.702 |
PCL_13074 | VFPBJ_08352 | A0A179H8Y3 | A0A179GDV4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Nitrate reductase. | 0.991 |
PCL_13074 | VFPBJ_09562 | A0A179H8Y3 | A0A179GEM7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 2-nitropropane dioxygenase. | 0.900 |
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