Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_01670 | PCL_02938 | A0A179HMT8 | A0A179HNT2 | SUMO ligase SizA. | Ubiquitin-like modifier SUMO. | 0.999 |
PCL_01670 | PCL_06381 | A0A179HMT8 | A0A179GSP5 | SUMO ligase SizA. | Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.993 |
PCL_01670 | PCL_10720 | A0A179HMT8 | A0A179HTJ4 | SUMO ligase SizA. | Ubiquitin-conjugating enzyme. | 0.973 |
PCL_01670 | VFPBJ_06797 | A0A179HMT8 | A0A179HW14 | SUMO ligase SizA. | ATP-depentend DNA helicase. | 0.406 |
PCL_01670 | VFPFJ_01316 | A0A179HMT8 | A0A179HXS8 | SUMO ligase SizA. | DNA damage tolerance protein rad31. | 0.645 |
PCL_01670 | VFPFJ_04898 | A0A179HMT8 | A0A179HMQ0 | SUMO ligase SizA. | Sentrin/SUMO-specific protease. | 0.667 |
PCL_01670 | VFPFJ_06826 | A0A179HMT8 | A0A179HFL2 | SUMO ligase SizA. | Ubiquitin-activating enzyme E1-like protein. | 0.645 |
PCL_01670 | VFPFJ_07985 | A0A179HMT8 | A0A179H5Y6 | SUMO ligase SizA. | Sentrin-specific protease. | 0.657 |
PCL_01670 | VFPFJ_09391 | A0A179HMT8 | A0A179GTZ7 | SUMO ligase SizA. | RNase3 domain-containingprotein. | 0.461 |
PCL_02938 | PCL_01670 | A0A179HNT2 | A0A179HMT8 | Ubiquitin-like modifier SUMO. | SUMO ligase SizA. | 0.999 |
PCL_02938 | PCL_06381 | A0A179HNT2 | A0A179GSP5 | Ubiquitin-like modifier SUMO. | Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.999 |
PCL_02938 | PCL_10720 | A0A179HNT2 | A0A179HTJ4 | Ubiquitin-like modifier SUMO. | Ubiquitin-conjugating enzyme. | 0.983 |
PCL_02938 | VFPBJ_06797 | A0A179HNT2 | A0A179HW14 | Ubiquitin-like modifier SUMO. | ATP-depentend DNA helicase. | 0.941 |
PCL_02938 | VFPBJ_10237 | A0A179HNT2 | A0A179GAU7 | Ubiquitin-like modifier SUMO. | Nucleoporin NUP49/NSP49. | 0.960 |
PCL_02938 | VFPFJ_01316 | A0A179HNT2 | A0A179HXS8 | Ubiquitin-like modifier SUMO. | DNA damage tolerance protein rad31. | 0.990 |
PCL_02938 | VFPFJ_04898 | A0A179HNT2 | A0A179HMQ0 | Ubiquitin-like modifier SUMO. | Sentrin/SUMO-specific protease. | 0.999 |
PCL_02938 | VFPFJ_06826 | A0A179HNT2 | A0A179HFL2 | Ubiquitin-like modifier SUMO. | Ubiquitin-activating enzyme E1-like protein. | 0.997 |
PCL_02938 | VFPFJ_07985 | A0A179HNT2 | A0A179H5Y6 | Ubiquitin-like modifier SUMO. | Sentrin-specific protease. | 0.991 |
PCL_02938 | VFPFJ_09391 | A0A179HNT2 | A0A179GTZ7 | Ubiquitin-like modifier SUMO. | RNase3 domain-containingprotein. | 0.999 |
PCL_06381 | PCL_01670 | A0A179GSP5 | A0A179HMT8 | Ubiquitin-conjugating enzyme E2-18 kDa; Belongs to the ubiquitin-conjugating enzyme family. | SUMO ligase SizA. | 0.993 |
page 1 of 4