Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_01152 | PCL_04734 | A0A179HNZ6 | A0A179HKP5 | Inositol oxygenase. | Phosphoserine phosphatase. | 0.483 |
PCL_01152 | PCL_05608 | A0A179HNZ6 | A0A179GD44 | Inositol oxygenase. | NAD-binding Rossmann fold oxidoreductase family protein. | 0.910 |
PCL_01152 | VFPBJ_00641 | A0A179HNZ6 | A0A179HAQ9 | Inositol oxygenase. | Inositol-1-monophosphatase. | 0.915 |
PCL_01152 | VFPBJ_03741 | A0A179HNZ6 | A0A179HHX9 | Inositol oxygenase. | Alcohol dehydrogenase-like protein. | 0.800 |
PCL_01152 | VFPBJ_05736 | A0A179HNZ6 | A0A179HEJ1 | Inositol oxygenase. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.903 |
PCL_01152 | VFPBJ_06120 | A0A179HNZ6 | A0A179GED3 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase 6. | 0.800 |
PCL_01152 | VFPBJ_06271 | A0A179HNZ6 | A0A179GRX9 | Inositol oxygenase. | NADP-dependent alcohol dehydrogenase. | 0.800 |
PCL_01152 | VFPBJ_07517 | A0A179HNZ6 | A0A179H8C8 | Inositol oxygenase. | Mevalonate kinase; Catalyzes the phosphorylation of mevalonate to mevalonate 5- phosphate, a key step in isoprenoid and cholesterol biosynthesis. Belongs to the GHMP kinase family. Mevalonate kinase subfamily. | 0.469 |
PCL_01152 | VFPFJ_02499 | A0A179HNZ6 | A0A179HV24 | Inositol oxygenase. | NAD(P)-binding domain. | 0.910 |
PCL_01152 | VFPFJ_10302 | A0A179HNZ6 | A0A179GJ93 | Inositol oxygenase. | Inositol-1-monophosphatase. | 0.915 |
PCL_04734 | PCL_01152 | A0A179HKP5 | A0A179HNZ6 | Phosphoserine phosphatase. | Inositol oxygenase. | 0.483 |
PCL_05608 | PCL_01152 | A0A179GD44 | A0A179HNZ6 | NAD-binding Rossmann fold oxidoreductase family protein. | Inositol oxygenase. | 0.910 |
PCL_05608 | VFPBJ_00641 | A0A179GD44 | A0A179HAQ9 | NAD-binding Rossmann fold oxidoreductase family protein. | Inositol-1-monophosphatase. | 0.907 |
PCL_05608 | VFPBJ_05736 | A0A179GD44 | A0A179HEJ1 | NAD-binding Rossmann fold oxidoreductase family protein. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.903 |
PCL_05608 | VFPFJ_02499 | A0A179GD44 | A0A179HV24 | NAD-binding Rossmann fold oxidoreductase family protein. | NAD(P)-binding domain. | 0.902 |
PCL_05608 | VFPFJ_10302 | A0A179GD44 | A0A179GJ93 | NAD-binding Rossmann fold oxidoreductase family protein. | Inositol-1-monophosphatase. | 0.907 |
VFPBJ_00641 | PCL_01152 | A0A179HAQ9 | A0A179HNZ6 | Inositol-1-monophosphatase. | Inositol oxygenase. | 0.915 |
VFPBJ_00641 | PCL_05608 | A0A179HAQ9 | A0A179GD44 | Inositol-1-monophosphatase. | NAD-binding Rossmann fold oxidoreductase family protein. | 0.907 |
VFPBJ_00641 | VFPBJ_05736 | A0A179HAQ9 | A0A179HEJ1 | Inositol-1-monophosphatase. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.929 |
VFPBJ_00641 | VFPFJ_02499 | A0A179HAQ9 | A0A179HV24 | Inositol-1-monophosphatase. | NAD(P)-binding domain. | 0.907 |
page 1 of 3