Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_03693 | PCL_11191 | A0A179HW46 | A0A179HUF0 | 2-oxoisovalerate dehydrogenase beta subunit. | Dihydrolipoyl dehydrogenase. | 0.991 |
PCL_03693 | VFPBJ_00259 | A0A179HW46 | A0A179H9W4 | 2-oxoisovalerate dehydrogenase beta subunit. | Isovaleryl-CoA dehydrogenase, mitochondrial. | 0.497 |
PCL_03693 | VFPBJ_07009 | A0A179HW46 | A0A179GN37 | 2-oxoisovalerate dehydrogenase beta subunit. | Acyl-CoA dehydrogenase. | 0.497 |
PCL_03693 | VFPBJ_07445 | A0A179HW46 | A0A179GI09 | 2-oxoisovalerate dehydrogenase beta subunit. | Pyruvate/2-oxoglutarate dehydrogenase. | 0.915 |
PCL_03693 | VFPFJ_03644 | A0A179HW46 | A0A179HPJ4 | 2-oxoisovalerate dehydrogenase beta subunit. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.998 |
PCL_03693 | VFPFJ_04135 | A0A179HW46 | A0A179HPM7 | 2-oxoisovalerate dehydrogenase beta subunit. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.999 |
PCL_03693 | VFPFJ_06541 | A0A179HW46 | A0A179HKD7 | 2-oxoisovalerate dehydrogenase beta subunit. | Acyl-CoA dehydrogenase, mitochondrial. | 0.490 |
PCL_07775 | VFPFJ_03644 | A0A179HMZ2 | A0A179HPJ4 | Methylmalonate-semialdehyde dehydrogenase, mitochondrial. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.928 |
PCL_07775 | VFPFJ_07000 | A0A179HMZ2 | A0A179HE45 | Methylmalonate-semialdehyde dehydrogenase, mitochondrial. | Acetyl-coenzyme A synthetase. | 0.910 |
PCL_07775 | VFPFJ_08567 | A0A179HMZ2 | A0A179GXZ9 | Methylmalonate-semialdehyde dehydrogenase, mitochondrial. | Acyl-CoA synthetase. | 0.910 |
PCL_11191 | PCL_03693 | A0A179HUF0 | A0A179HW46 | Dihydrolipoyl dehydrogenase. | 2-oxoisovalerate dehydrogenase beta subunit. | 0.991 |
PCL_11191 | VFPFJ_03644 | A0A179HUF0 | A0A179HPJ4 | Dihydrolipoyl dehydrogenase. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.995 |
PCL_11191 | VFPFJ_04135 | A0A179HUF0 | A0A179HPM7 | Dihydrolipoyl dehydrogenase. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.987 |
VFPBJ_00259 | PCL_03693 | A0A179H9W4 | A0A179HW46 | Isovaleryl-CoA dehydrogenase, mitochondrial. | 2-oxoisovalerate dehydrogenase beta subunit. | 0.497 |
VFPBJ_00259 | VFPBJ_07009 | A0A179H9W4 | A0A179GN37 | Isovaleryl-CoA dehydrogenase, mitochondrial. | Acyl-CoA dehydrogenase. | 0.908 |
VFPBJ_00259 | VFPFJ_03644 | A0A179H9W4 | A0A179HPJ4 | Isovaleryl-CoA dehydrogenase, mitochondrial. | Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex. | 0.956 |
VFPBJ_00259 | VFPFJ_04135 | A0A179H9W4 | A0A179HPM7 | Isovaleryl-CoA dehydrogenase, mitochondrial. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.648 |
VFPBJ_00259 | VFPFJ_07000 | A0A179H9W4 | A0A179HE45 | Isovaleryl-CoA dehydrogenase, mitochondrial. | Acetyl-coenzyme A synthetase. | 0.405 |
VFPBJ_00259 | VFPFJ_08567 | A0A179H9W4 | A0A179GXZ9 | Isovaleryl-CoA dehydrogenase, mitochondrial. | Acyl-CoA synthetase. | 0.405 |
VFPBJ_07009 | PCL_03693 | A0A179GN37 | A0A179HW46 | Acyl-CoA dehydrogenase. | 2-oxoisovalerate dehydrogenase beta subunit. | 0.497 |
page 1 of 3