Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PCL_06744 | PCL_08118 | A0A179HKL0 | A0A179H3B8 | Flavoprotein. | Primosome PriB/single-strand DNA-binding protein. | 0.480 |
| PCL_06744 | VFPBJ_05696 | A0A179HKL0 | A0A179GS57 | Flavoprotein. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.654 |
| PCL_06744 | VFPBJ_10741 | A0A179HKL0 | A0A179FUM3 | Flavoprotein. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.462 |
| PCL_06744 | VFPFJ_01846 | A0A179HKL0 | A0A179HQH2 | Flavoprotein. | Uncharacterized protein. | 0.559 |
| PCL_06744 | VFPFJ_07065 | A0A179HKL0 | A0A179HGL1 | Flavoprotein. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.725 |
| PCL_06744 | VFPFJ_08228 | A0A179HKL0 | A0A179H8V6 | Flavoprotein. | Nucleoside diphosphate kinase. | 0.747 |
| PCL_06744 | VFPFJ_09312 | A0A179HKL0 | A0A179GUQ5 | Flavoprotein. | Thymidylate synthase. | 0.765 |
| PCL_07803 | VFPBJ_10741 | A0A179H4R9 | A0A179FUM3 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.593 |
| PCL_07803 | VFPFJ_00487 | A0A179H4R9 | A0A179HY13 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | tRNA-splicing endonuclease. | 0.448 |
| PCL_07803 | VFPFJ_01846 | A0A179H4R9 | A0A179HQH2 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Uncharacterized protein. | 0.622 |
| PCL_07803 | VFPFJ_07065 | A0A179H4R9 | A0A179HGL1 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.846 |
| PCL_08118 | PCL_06744 | A0A179H3B8 | A0A179HKL0 | Primosome PriB/single-strand DNA-binding protein. | Flavoprotein. | 0.480 |
| PCL_08118 | VFPFJ_01846 | A0A179H3B8 | A0A179HQH2 | Primosome PriB/single-strand DNA-binding protein. | Uncharacterized protein. | 0.585 |
| PCL_08118 | VFPFJ_07065 | A0A179H3B8 | A0A179HGL1 | Primosome PriB/single-strand DNA-binding protein. | Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. | 0.441 |
| PCL_08118 | VFPFJ_08228 | A0A179H3B8 | A0A179H8V6 | Primosome PriB/single-strand DNA-binding protein. | Nucleoside diphosphate kinase. | 0.458 |
| VFPBJ_01310 | VFPFJ_01846 | A0A179HCG2 | A0A179HQH2 | NADH pyrophosphatase. | Uncharacterized protein. | 0.570 |
| VFPBJ_01310 | VFPFJ_08228 | A0A179HCG2 | A0A179H8V6 | NADH pyrophosphatase. | Nucleoside diphosphate kinase. | 0.402 |
| VFPBJ_05696 | PCL_06744 | A0A179GS57 | A0A179HKL0 | Glyceraldehyde-3-phosphate dehydrogenase. | Flavoprotein. | 0.654 |
| VFPBJ_05696 | VFPBJ_10741 | A0A179GS57 | A0A179FUM3 | Glyceraldehyde-3-phosphate dehydrogenase. | Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. | 0.999 |
| VFPBJ_05696 | VFPFJ_01846 | A0A179GS57 | A0A179HQH2 | Glyceraldehyde-3-phosphate dehydrogenase. | Uncharacterized protein. | 0.642 |
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