Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_05286 | VFPFJ_02205 | A0A179HMV4 | A0A179HSM9 | HLH transcription factor. | Peptidase S8/S53, subtilisin/kexin/sedolisin. | 0.478 |
PCL_05286 | VFPFJ_07724 | A0A179HMV4 | A0A179H582 | HLH transcription factor. | Sterol regulatory element-binding protein cleavage-activating protein. | 0.922 |
VFPFJ_02205 | PCL_05286 | A0A179HSM9 | A0A179HMV4 | Peptidase S8/S53, subtilisin/kexin/sedolisin. | HLH transcription factor. | 0.478 |
VFPFJ_02205 | VFPFJ_02748 | A0A179HSM9 | A0A179HSZ0 | Peptidase S8/S53, subtilisin/kexin/sedolisin. | Sterol regulatory element binding protein Sre1. | 0.478 |
VFPFJ_02205 | VFPFJ_07724 | A0A179HSM9 | A0A179H582 | Peptidase S8/S53, subtilisin/kexin/sedolisin. | Sterol regulatory element-binding protein cleavage-activating protein. | 0.491 |
VFPFJ_02748 | VFPFJ_02205 | A0A179HSZ0 | A0A179HSM9 | Sterol regulatory element binding protein Sre1. | Peptidase S8/S53, subtilisin/kexin/sedolisin. | 0.478 |
VFPFJ_02748 | VFPFJ_07724 | A0A179HSZ0 | A0A179H582 | Sterol regulatory element binding protein Sre1. | Sterol regulatory element-binding protein cleavage-activating protein. | 0.957 |
VFPFJ_07724 | PCL_05286 | A0A179H582 | A0A179HMV4 | Sterol regulatory element-binding protein cleavage-activating protein. | HLH transcription factor. | 0.922 |
VFPFJ_07724 | VFPFJ_02205 | A0A179H582 | A0A179HSM9 | Sterol regulatory element-binding protein cleavage-activating protein. | Peptidase S8/S53, subtilisin/kexin/sedolisin. | 0.491 |
VFPFJ_07724 | VFPFJ_02748 | A0A179H582 | A0A179HSZ0 | Sterol regulatory element-binding protein cleavage-activating protein. | Sterol regulatory element binding protein Sre1. | 0.957 |