Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_06154 | VFPBJ_08203 | A0A179GCE5 | A0A179GK47 | Fungal specific transcription factor. | Long-chain fatty acid transporter. | 0.830 |
PCL_06154 | VFPFJ_02828 | A0A179GCE5 | A0A179HT62 | Fungal specific transcription factor. | Clr5 domain-containing protein. | 0.545 |
PCL_06154 | VFPFJ_04451 | A0A179GCE5 | A0A179HK30 | Fungal specific transcription factor. | Uncharacterized protein. | 0.830 |
PCL_06154 | VFPFJ_09179 | A0A179GCE5 | A0A179GS16 | Fungal specific transcription factor. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.600 |
VFPBJ_08203 | PCL_06154 | A0A179GK47 | A0A179GCE5 | Long-chain fatty acid transporter. | Fungal specific transcription factor. | 0.830 |
VFPBJ_08203 | VFPFJ_02828 | A0A179GK47 | A0A179HT62 | Long-chain fatty acid transporter. | Clr5 domain-containing protein. | 0.517 |
VFPBJ_08203 | VFPFJ_09179 | A0A179GK47 | A0A179GS16 | Long-chain fatty acid transporter. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.830 |
VFPBJ_11349 | VFPFJ_00974 | A0A179FET8 | A0A179HWI7 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | GRF zinc finger domain-containing protein. | 0.928 |
VFPBJ_11349 | VFPFJ_02828 | A0A179FET8 | A0A179HT62 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Clr5 domain-containing protein. | 0.502 |
VFPBJ_11349 | VFPFJ_03724 | A0A179FET8 | A0A179HPS3 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Ankyrin repeat domain-containing protein 28. | 0.589 |
VFPBJ_11349 | VFPFJ_06888 | A0A179FET8 | A0A179HG18 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | CFEM domain-containing protein. | 0.795 |
VFPFJ_00974 | VFPBJ_11349 | A0A179HWI7 | A0A179FET8 | GRF zinc finger domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.928 |
VFPFJ_00974 | VFPFJ_02828 | A0A179HWI7 | A0A179HT62 | GRF zinc finger domain-containing protein. | Clr5 domain-containing protein. | 0.703 |
VFPFJ_00974 | VFPFJ_03724 | A0A179HWI7 | A0A179HPS3 | GRF zinc finger domain-containing protein. | Ankyrin repeat domain-containing protein 28. | 0.638 |
VFPFJ_02828 | PCL_06154 | A0A179HT62 | A0A179GCE5 | Clr5 domain-containing protein. | Fungal specific transcription factor. | 0.545 |
VFPFJ_02828 | VFPBJ_08203 | A0A179HT62 | A0A179GK47 | Clr5 domain-containing protein. | Long-chain fatty acid transporter. | 0.517 |
VFPFJ_02828 | VFPBJ_11349 | A0A179HT62 | A0A179FET8 | Clr5 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.502 |
VFPFJ_02828 | VFPFJ_00974 | A0A179HT62 | A0A179HWI7 | Clr5 domain-containing protein. | GRF zinc finger domain-containing protein. | 0.703 |
VFPFJ_02828 | VFPFJ_03724 | A0A179HT62 | A0A179HPS3 | Clr5 domain-containing protein. | Ankyrin repeat domain-containing protein 28. | 0.651 |
VFPFJ_02828 | VFPFJ_04429 | A0A179HT62 | A0A179HLC6 | Clr5 domain-containing protein. | C-x8-C-x5-C-x3-H type zinc finger protein. | 0.566 |
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