Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VFPBJ_01213 | VFPBJ_06807 | A0A179I072 | A0A179HVI5 | Histone-fold domain-containing protein. | TATA-box binding protein. | 0.992 |
VFPBJ_01213 | VFPFJ_02997 | A0A179I072 | A0A179HUY6 | Histone-fold domain-containing protein. | Fungal specific transcription factor. | 0.892 |
VFPBJ_01213 | VFPFJ_05549 | A0A179I072 | A0A179HI44 | Histone-fold domain-containing protein. | TBP associated factor. | 0.904 |
VFPBJ_06807 | VFPBJ_01213 | A0A179HVI5 | A0A179I072 | TATA-box binding protein. | Histone-fold domain-containing protein. | 0.992 |
VFPBJ_06807 | VFPFJ_01469 | A0A179HVI5 | A0A179I0X1 | TATA-box binding protein. | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | 0.442 |
VFPBJ_06807 | VFPFJ_02997 | A0A179HVI5 | A0A179HUY6 | TATA-box binding protein. | Fungal specific transcription factor. | 0.846 |
VFPBJ_06807 | VFPFJ_04386 | A0A179HVI5 | A0A179HJ02 | TATA-box binding protein. | SAGA complex subunit Sgf29. | 0.841 |
VFPBJ_06807 | VFPFJ_05549 | A0A179HVI5 | A0A179HI44 | TATA-box binding protein. | TBP associated factor. | 0.994 |
VFPBJ_06807 | VFPFJ_09844 | A0A179HVI5 | A0A179GPE4 | TATA-box binding protein. | Histone acetyltransferase subunit 3-like protein. | 0.912 |
VFPFJ_01469 | VFPBJ_06807 | A0A179I0X1 | A0A179HVI5 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | TATA-box binding protein. | 0.442 |
VFPFJ_01469 | VFPFJ_02997 | A0A179I0X1 | A0A179HUY6 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | Fungal specific transcription factor. | 0.691 |
VFPFJ_01469 | VFPFJ_04386 | A0A179I0X1 | A0A179HJ02 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | SAGA complex subunit Sgf29. | 0.995 |
VFPFJ_01469 | VFPFJ_09844 | A0A179I0X1 | A0A179GPE4 | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | Histone acetyltransferase subunit 3-like protein. | 0.999 |
VFPFJ_02997 | VFPBJ_01213 | A0A179HUY6 | A0A179I072 | Fungal specific transcription factor. | Histone-fold domain-containing protein. | 0.892 |
VFPFJ_02997 | VFPBJ_06807 | A0A179HUY6 | A0A179HVI5 | Fungal specific transcription factor. | TATA-box binding protein. | 0.846 |
VFPFJ_02997 | VFPFJ_01469 | A0A179HUY6 | A0A179I0X1 | Fungal specific transcription factor. | Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. | 0.691 |
VFPFJ_02997 | VFPFJ_03442 | A0A179HUY6 | A0A179HPC3 | Fungal specific transcription factor. | CBF/NF-Y family transcription factor. | 0.754 |
VFPFJ_02997 | VFPFJ_04386 | A0A179HUY6 | A0A179HJ02 | Fungal specific transcription factor. | SAGA complex subunit Sgf29. | 0.675 |
VFPFJ_02997 | VFPFJ_05549 | A0A179HUY6 | A0A179HI44 | Fungal specific transcription factor. | TBP associated factor. | 0.712 |
VFPFJ_02997 | VFPFJ_09844 | A0A179HUY6 | A0A179GPE4 | Fungal specific transcription factor. | Histone acetyltransferase subunit 3-like protein. | 0.606 |
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