Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_01471 | PCL_02371 | A0A179GVY0 | A0A179H4A2 | Biotin synthase. | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.679 |
PCL_01471 | PCL_11694 | A0A179GVY0 | A0A179HXD5 | Biotin synthase. | Ornithine aminotransferase. | 0.890 |
PCL_01471 | VFPBJ_03309 | A0A179GVY0 | A0A179HFB3 | Biotin synthase. | Glutamate 5-kinase. | 0.654 |
PCL_01471 | VFPFJ_06572 | A0A179GVY0 | A0A179HD37 | Biotin synthase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.652 |
PCL_02371 | PCL_01471 | A0A179H4A2 | A0A179GVY0 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Biotin synthase. | 0.679 |
PCL_02371 | PCL_11694 | A0A179H4A2 | A0A179HXD5 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ornithine aminotransferase. | 0.997 |
PCL_02371 | VFPBJ_03309 | A0A179H4A2 | A0A179HFB3 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Glutamate 5-kinase. | 0.731 |
PCL_02371 | VFPBJ_10649 | A0A179H4A2 | A0A179G341 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Arginase; Belongs to the arginase family. | 0.676 |
PCL_02371 | VFPFJ_06506 | A0A179H4A2 | A0A179HL33 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ureohydrolase; Belongs to the arginase family. | 0.676 |
PCL_02371 | VFPFJ_06572 | A0A179H4A2 | A0A179HD37 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.746 |
PCL_02371 | VFPFJ_06982 | A0A179H4A2 | A0A179HE68 | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.990 |
PCL_05288 | PCL_11694 | A0A179HMW6 | A0A179HXD5 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Ornithine aminotransferase. | 0.944 |
PCL_05288 | VFPBJ_03309 | A0A179HMW6 | A0A179HFB3 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate 5-kinase. | 0.946 |
PCL_05288 | VFPFJ_01793 | A0A179HMW6 | A0A179HRY1 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.902 |
PCL_05288 | VFPFJ_10588 | A0A179HMW6 | A0A179GG54 | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.902 |
PCL_11694 | PCL_01471 | A0A179HXD5 | A0A179GVY0 | Ornithine aminotransferase. | Biotin synthase. | 0.890 |
PCL_11694 | PCL_02371 | A0A179HXD5 | A0A179H4A2 | Ornithine aminotransferase. | Protein arg-6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family. | 0.997 |
PCL_11694 | PCL_05288 | A0A179HXD5 | A0A179HMW6 | Ornithine aminotransferase. | Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.944 |
PCL_11694 | VFPBJ_03309 | A0A179HXD5 | A0A179HFB3 | Ornithine aminotransferase. | Glutamate 5-kinase. | 0.955 |
PCL_11694 | VFPBJ_10649 | A0A179HXD5 | A0A179G341 | Ornithine aminotransferase. | Arginase; Belongs to the arginase family. | 0.988 |
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