Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_10427 | VFPFJ_01545 | A0A179H1V5 | A0A179HY26 | Alpha subunit of casein kinase; Belongs to the protein kinase superfamily. | Dual specificity phosphatase. | 0.666 |
PCL_11424 | VFPBJ_06723 | A0A179I166 | A0A179HT55 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Ubiquitin. | 0.649 |
PCL_11424 | VFPFJ_01545 | A0A179I166 | A0A179HY26 | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | Dual specificity phosphatase. | 0.902 |
VFPBJ_00627 | VFPBJ_06723 | A0A179H8Z3 | A0A179HT55 | Eukaryotic translation initiation factor 5A. | Ubiquitin. | 0.997 |
VFPBJ_00627 | VFPFJ_01545 | A0A179H8Z3 | A0A179HY26 | Eukaryotic translation initiation factor 5A. | Dual specificity phosphatase. | 0.641 |
VFPBJ_00627 | VFPFJ_06294 | A0A179H8Z3 | A0A179HK87 | Eukaryotic translation initiation factor 5A. | Baculoviral inhibition of apoptosis protein repeat protein. | 0.741 |
VFPBJ_00627 | VFPFJ_06497 | A0A179H8Z3 | A0A179HJC0 | Eukaryotic translation initiation factor 5A. | U-box domain-containing protein. | 0.694 |
VFPBJ_00627 | VFPFJ_07798 | A0A179H8Z3 | A0A179H7J7 | Eukaryotic translation initiation factor 5A. | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | 0.975 |
VFPBJ_00627 | VFPFJ_09682 | A0A179H8Z3 | A0A179GTF0 | Eukaryotic translation initiation factor 5A. | Ubiquitin carboxyl-terminal hydrolase. | 0.952 |
VFPBJ_06723 | PCL_11424 | A0A179HT55 | A0A179I166 | Ubiquitin. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.649 |
VFPBJ_06723 | VFPBJ_00627 | A0A179HT55 | A0A179H8Z3 | Ubiquitin. | Eukaryotic translation initiation factor 5A. | 0.997 |
VFPBJ_06723 | VFPFJ_01545 | A0A179HT55 | A0A179HY26 | Ubiquitin. | Dual specificity phosphatase. | 0.658 |
VFPBJ_06723 | VFPFJ_04872 | A0A179HT55 | A0A179HMX2 | Ubiquitin. | Ras GTPase activator. | 0.448 |
VFPBJ_06723 | VFPFJ_06294 | A0A179HT55 | A0A179HK87 | Ubiquitin. | Baculoviral inhibition of apoptosis protein repeat protein. | 0.854 |
VFPBJ_06723 | VFPFJ_06497 | A0A179HT55 | A0A179HJC0 | Ubiquitin. | U-box domain-containing protein. | 0.669 |
VFPBJ_06723 | VFPFJ_07798 | A0A179HT55 | A0A179H7J7 | Ubiquitin. | Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family. | 0.929 |
VFPBJ_06723 | VFPFJ_09682 | A0A179HT55 | A0A179GTF0 | Ubiquitin. | Ubiquitin carboxyl-terminal hydrolase. | 0.972 |
VFPFJ_01545 | PCL_10427 | A0A179HY26 | A0A179H1V5 | Dual specificity phosphatase. | Alpha subunit of casein kinase; Belongs to the protein kinase superfamily. | 0.666 |
VFPFJ_01545 | PCL_11424 | A0A179HY26 | A0A179I166 | Dual specificity phosphatase. | Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. | 0.902 |
VFPFJ_01545 | VFPBJ_00627 | A0A179HY26 | A0A179H8Z3 | Dual specificity phosphatase. | Eukaryotic translation initiation factor 5A. | 0.641 |
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