Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCL_02888 | VFPBJ_00475 | A0A179HPU0 | A0A179HVJ0 | Tho complex subunit 3. | ATP-dependent RNA helicase SUB2. | 0.928 |
PCL_02888 | VFPBJ_01232 | A0A179HPU0 | A0A179HXM4 | Tho complex subunit 3. | Pre-mRNA-splicing factor SPP2. | 0.925 |
PCL_02888 | VFPBJ_03182 | A0A179HPU0 | A0A179H2N4 | Tho complex subunit 3. | RNA binding protein. | 0.980 |
PCL_02888 | VFPBJ_04378 | A0A179HPU0 | A0A179GV82 | Tho complex subunit 3. | THO complex, subunit 5. | 0.998 |
PCL_02888 | VFPFJ_01151 | A0A179HPU0 | A0A179HYR6 | Tho complex subunit 3. | Nuclear matrix protein. | 0.999 |
PCL_02888 | VFPFJ_01461 | A0A179HPU0 | A0A179I0I4 | Tho complex subunit 3. | Tho2 protein. | 0.924 |
PCL_02888 | VFPFJ_02984 | A0A179HPU0 | A0A179HW93 | Tho complex subunit 3. | DNA-binding SAP. | 0.841 |
PCL_02888 | VFPFJ_05046 | A0A179HPU0 | A0A179HKS5 | Tho complex subunit 3. | Tho complex subunit 7/Mft1p. | 0.998 |
PCL_02888 | VFPFJ_06763 | A0A179HPU0 | A0A179HF96 | Tho complex subunit 3. | RNA recognition domain-containing protein. | 0.980 |
PCL_02888 | VFPFJ_08459 | A0A179HPU0 | A0A179GXF8 | Tho complex subunit 3. | Fungal transcriptional regulatory protein. | 0.925 |
VFPBJ_00475 | PCL_02888 | A0A179HVJ0 | A0A179HPU0 | ATP-dependent RNA helicase SUB2. | Tho complex subunit 3. | 0.928 |
VFPBJ_00475 | VFPBJ_01232 | A0A179HVJ0 | A0A179HXM4 | ATP-dependent RNA helicase SUB2. | Pre-mRNA-splicing factor SPP2. | 0.946 |
VFPBJ_00475 | VFPBJ_03182 | A0A179HVJ0 | A0A179H2N4 | ATP-dependent RNA helicase SUB2. | RNA binding protein. | 0.996 |
VFPBJ_00475 | VFPBJ_04378 | A0A179HVJ0 | A0A179GV82 | ATP-dependent RNA helicase SUB2. | THO complex, subunit 5. | 0.960 |
VFPBJ_00475 | VFPFJ_01151 | A0A179HVJ0 | A0A179HYR6 | ATP-dependent RNA helicase SUB2. | Nuclear matrix protein. | 0.962 |
VFPBJ_00475 | VFPFJ_02984 | A0A179HVJ0 | A0A179HW93 | ATP-dependent RNA helicase SUB2. | DNA-binding SAP. | 0.977 |
VFPBJ_00475 | VFPFJ_05046 | A0A179HVJ0 | A0A179HKS5 | ATP-dependent RNA helicase SUB2. | Tho complex subunit 7/Mft1p. | 0.955 |
VFPBJ_00475 | VFPFJ_06763 | A0A179HVJ0 | A0A179HF96 | ATP-dependent RNA helicase SUB2. | RNA recognition domain-containing protein. | 0.999 |
VFPBJ_00475 | VFPFJ_08459 | A0A179HVJ0 | A0A179GXF8 | ATP-dependent RNA helicase SUB2. | Fungal transcriptional regulatory protein. | 0.946 |
VFPBJ_01232 | PCL_02888 | A0A179HXM4 | A0A179HPU0 | Pre-mRNA-splicing factor SPP2. | Tho complex subunit 3. | 0.925 |
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