STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_01504SNF2 family helicase/ATPase PasG. (894 aa)    
Predicted Functional Partners:
PCL_01691
DDT domain-containingprotein.
    
 0.866
VFPFJ_00974
GRF zinc finger domain-containing protein.
   
 0.780
VFPFJ_07988
Chromatin assembly factor 1 subunit C.
   
 0.765
VFPFJ_01090
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.752
PCL_11208
Histone H2B; Belongs to the histone H2B family.
   
 0.710
VFPFJ_03442
CBF/NF-Y family transcription factor.
    
 0.708
VFPFJ_07627
Uncharacterized protein.
   
 
 0.681
VFPFJ_01923
EXO1 protein.
   
 0.666
VFPBJ_04420
Cell division control protein; Belongs to the CDC6/cdc18 family.
   
 
 0.650
VFPFJ_09795
Kinesin family protein (BimC); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.599
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
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