STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VFPFJ_01240Pre-mRNA-splicing factor 38B. (893 aa)    
Predicted Functional Partners:
VFPFJ_03695
Ubiquitin-conjugating enzyme E2C-binding protein.
    
 0.800
VFPBJ_04276
YTH domain-containing protein.
   
 
 0.791
VFPFJ_07044
Endoribonuclease ysh1.
    
 
 0.777
VFPFJ_01879
Cleavage and polyadenylation specificity factor subunit 2.
    
 
 0.777
VFPFJ_10123
Protein CFT1.
    
 
 0.775
VFPBJ_03586
Polyadenylation factor subunit 2.
   
 
 0.772
VFPFJ_05177
mRNA cleavage and polyadenylation specificity factor complex subunit.
    
 
 0.759
VFPBJ_10238
Fip1 like protein.
    
 
 0.757
PCL_10295
RNA polymerase II subunit A.
    
 
 0.745
VFPBJ_10947
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2.
    
 
 0.745
Your Current Organism:
Purpureocillium lilacinum
NCBI taxonomy Id: 33203
Other names: ATCC 10114, CBS 284.36, CCRC 31616, CCRC:31616, DSM 846, IMI 027830, JCM 9332, NCTC 584, NRRL 895, P. lilacinum, Paecilomyces lilacinum, Paecilomyces lilacinus, Penicillium lilacinum, Purpureocillium lilacinum (Thom) Luangsa-ard, Houbraken, Hywel-Jones & Samson 2011, QM 7592, VKM F-3193
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.