STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODR84124.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (56 aa)    
Predicted Functional Partners:
ODR84125.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TorC/TorY family.
  
  
 0.857
ODR84126.1
Catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.812
torD
Molecular chaperone TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
     
 0.701
ODR85158.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.701
napD
Sorbose reductase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.479
napD-2
Glutamate synthase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
  
 0.479
ODR87243.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.457
ODR85470.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.416
ODR84505.1
Quinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.409
Your Current Organism:
Shewanella xiamenensis
NCBI taxonomy Id: 332186
Other names: CCTCC M 209017, JCM 16212, S. xiamenensis, Shewanella sp. S4, Shewanella xiamenensis Huang et al. 2010, strain S4
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