STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODR87195.1D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)    
Predicted Functional Partners:
ftsI
Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.
     
 0.935
ODR87839.1
D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.
     
 0.927
ODR84379.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.787
pbpG
D-alanyl-D-alanine endopeptidase; Specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.
     
 0.780
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 0.777
ODR84383.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.736
ODR84380.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.702
ODR85468.1
Penicillin-sensitive transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.677
ODR86026.1
L,D-transpeptidase; Catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.673
ODR88028.1
ErfK/YbiS/YcfS/YnhG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.647
Your Current Organism:
Shewanella xiamenensis
NCBI taxonomy Id: 332186
Other names: CCTCC M 209017, JCM 16212, S. xiamenensis, Shewanella sp. S4, Shewanella xiamenensis Huang et al. 2010, strain S4
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