STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV33611.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
KJV33609.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KJV33610.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
KJV33612.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
KJV27428.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
  
 0.990
KJV27340.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.988
KJV25835.1
Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.986
KJV25839.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.986
KJV27341.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.977
KJV26199.1
Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.970
KJV25838.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
  
 0.962
Your Current Organism:
Aquitalea magnusonii
NCBI taxonomy Id: 332411
Other names: A. magnusonii, Aquitalea magnusonii Lau et al. 2006, DSM 25134, LMG 23054, LMG:23054, NBRC 103050, beta proteobacterium TRO-001DR8, strain TRO-001DR8
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