STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV32864.1Nicotinamide mononucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
cobB
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
    0.616
KJV33401.1
Blue light sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.481
KJV30366.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
KJV29265.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.
   
    0.457
KJV25985.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.448
KJV32710.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
KJV32709.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
KJV32711.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
KJV24959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
KJV25708.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.419
Your Current Organism:
Aquitalea magnusonii
NCBI taxonomy Id: 332411
Other names: A. magnusonii, Aquitalea magnusonii Lau et al. 2006, DSM 25134, LMG 23054, LMG:23054, NBRC 103050, beta proteobacterium TRO-001DR8, strain TRO-001DR8
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