STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV27164.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (259 aa)    
Predicted Functional Partners:
KJV27165.1
Histidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
KJV27166.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
KJV27167.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.970
KJV29061.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.822
KJV26118.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.821
KJV25186.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.819
KJV29073.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.813
KJV26117.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
KJV29628.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.799
KJV25832.1
Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   0.784
Your Current Organism:
Aquitalea magnusonii
NCBI taxonomy Id: 332411
Other names: A. magnusonii, Aquitalea magnusonii Lau et al. 2006, DSM 25134, LMG 23054, LMG:23054, NBRC 103050, beta proteobacterium TRO-001DR8, strain TRO-001DR8
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