Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJV26224.1 | KJV26225.1 | VI06_17105 | VI06_17110 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.403 |
KJV26224.1 | kdpA | VI06_17105 | VI06_17100 | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.773 |
KJV26225.1 | KJV26224.1 | VI06_17110 | VI06_17105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
KJV26225.1 | KJV26226.1 | VI06_17110 | VI06_17115 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.404 |
KJV26225.1 | kdpA | VI06_17110 | VI06_17100 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | 0.403 |
KJV26226.1 | KJV26225.1 | VI06_17115 | VI06_17110 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.404 |
kdpA | KJV26224.1 | VI06_17100 | VI06_17105 | ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
kdpA | KJV26225.1 | VI06_17100 | VI06_17110 | ATPase; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.403 |