Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM30452.1 | SDM30546.1 | SAMN04487766_101286 | SAMN04487766_101289 | Chlorite dismutase. | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | 0.703 |
SDM30452.1 | SDM30567.1 | SAMN04487766_101286 | SAMN04487766_101290 | Chlorite dismutase. | Oxygen-dependent protoporphyrinogen oxidase. | 0.938 |
SDM30452.1 | SDM30596.1 | SAMN04487766_101286 | SAMN04487766_101291 | Chlorite dismutase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.664 |
SDM30452.1 | SDM30626.1 | SAMN04487766_101286 | SAMN04487766_101292 | Chlorite dismutase. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.750 |
SDM30452.1 | SDM30658.1 | SAMN04487766_101286 | SAMN04487766_101293 | Chlorite dismutase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.635 |
SDM30452.1 | hemA | SAMN04487766_101286 | SAMN04487766_101288 | Chlorite dismutase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.840 |
SDM30452.1 | hemH | SAMN04487766_101286 | SAMN04487766_101287 | Chlorite dismutase. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.999 |
SDM30452.1 | hemL | SAMN04487766_101286 | SAMN04487766_101294 | Chlorite dismutase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.400 |
SDM30546.1 | SDM30452.1 | SAMN04487766_101289 | SAMN04487766_101286 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Chlorite dismutase. | 0.703 |
SDM30546.1 | SDM30567.1 | SAMN04487766_101289 | SAMN04487766_101290 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Oxygen-dependent protoporphyrinogen oxidase. | 0.999 |
SDM30546.1 | SDM30596.1 | SAMN04487766_101289 | SAMN04487766_101291 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.995 |
SDM30546.1 | SDM30626.1 | SAMN04487766_101289 | SAMN04487766_101292 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.991 |
SDM30546.1 | SDM30658.1 | SAMN04487766_101289 | SAMN04487766_101293 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.965 |
SDM30546.1 | SDM61754.1 | SAMN04487766_101289 | SAMN04487766_104188 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Fatty acid synthase. | 0.402 |
SDM30546.1 | hemA | SAMN04487766_101289 | SAMN04487766_101288 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.925 |
SDM30546.1 | hemH | SAMN04487766_101289 | SAMN04487766_101287 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.978 |
SDM30546.1 | hemL | SAMN04487766_101289 | SAMN04487766_101294 | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily. | 0.945 |
SDM30567.1 | SDM30452.1 | SAMN04487766_101290 | SAMN04487766_101286 | Oxygen-dependent protoporphyrinogen oxidase. | Chlorite dismutase. | 0.938 |
SDM30567.1 | SDM30546.1 | SAMN04487766_101290 | SAMN04487766_101289 | Oxygen-dependent protoporphyrinogen oxidase. | Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family. | 0.999 |
SDM30567.1 | SDM30596.1 | SAMN04487766_101290 | SAMN04487766_101291 | Oxygen-dependent protoporphyrinogen oxidase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.979 |
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