Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM41660.1 | SDM64601.1 | SAMN04487766_102181 | SAMN04487766_1054 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Hypothetical protein. | 0.402 |
SDM41660.1 | SDM68217.1 | SAMN04487766_102181 | SAMN04487766_105139 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | L-asparaginase. | 0.425 |
SDM41660.1 | SDM76397.1 | SAMN04487766_102181 | SAMN04487766_106166 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Aspartate ammonia-lyase. | 0.450 |
SDM41660.1 | SDM94170.1 | SAMN04487766_102181 | SAMN04487766_10971 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.849 |
SDM41660.1 | SDN09702.1 | SAMN04487766_102181 | SAMN04487766_11346 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Aspartate/methionine/tyrosine aminotransferase. | 0.827 |
SDM41660.1 | SDN33747.1 | SAMN04487766_102181 | SAMN04487766_1277 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Acetyltransferase (GNAT) family protein. | 0.402 |
SDM41660.1 | panC | SAMN04487766_102181 | SAMN04487766_10139 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.794 |
SDM41660.1 | panD | SAMN04487766_102181 | SAMN04487766_10136 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.860 |
SDM41660.1 | purA | SAMN04487766_102181 | SAMN04487766_101154 | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.508 |
SDM64601.1 | SDM41660.1 | SAMN04487766_1054 | SAMN04487766_102181 | Hypothetical protein. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.402 |
SDM64601.1 | panD | SAMN04487766_1054 | SAMN04487766_10136 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.780 |
SDM68217.1 | SDM41660.1 | SAMN04487766_105139 | SAMN04487766_102181 | L-asparaginase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.425 |
SDM68217.1 | SDM76397.1 | SAMN04487766_105139 | SAMN04487766_106166 | L-asparaginase. | Aspartate ammonia-lyase. | 0.975 |
SDM68217.1 | SDM94170.1 | SAMN04487766_105139 | SAMN04487766_10971 | L-asparaginase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.863 |
SDM68217.1 | SDN09702.1 | SAMN04487766_105139 | SAMN04487766_11346 | L-asparaginase. | Aspartate/methionine/tyrosine aminotransferase. | 0.937 |
SDM68217.1 | panD | SAMN04487766_105139 | SAMN04487766_10136 | L-asparaginase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.936 |
SDM76397.1 | SDM41660.1 | SAMN04487766_106166 | SAMN04487766_102181 | Aspartate ammonia-lyase. | Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase. | 0.450 |
SDM76397.1 | SDM68217.1 | SAMN04487766_106166 | SAMN04487766_105139 | Aspartate ammonia-lyase. | L-asparaginase. | 0.975 |
SDM76397.1 | SDM94170.1 | SAMN04487766_106166 | SAMN04487766_10971 | Aspartate ammonia-lyase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.808 |
SDM76397.1 | SDN09702.1 | SAMN04487766_106166 | SAMN04487766_11346 | Aspartate ammonia-lyase. | Aspartate/methionine/tyrosine aminotransferase. | 0.966 |
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