STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM41436.1Transcriptional regulator, LacI family. (338 aa)    
Predicted Functional Partners:
SDN00230.1
Transcriptional regulator, LacI family.
  
     0.774
SDN08962.1
Transcriptional regulator, LacI family.
  
     0.774
SDN09121.1
Transcriptional regulator, LacI family.
  
     0.774
SDN26725.1
LacI family transcriptional regulator.
  
     0.773
SDM23410.1
PTS system, beta-glucosides-specific IIC component.
    
 0.663
SDM51940.1
PTS system, beta-glucosides-specific IIC component.
    
 0.663
SDM60944.1
PTS system, sucrose-specific IIC component.
    
 0.663
SDM74505.1
PTS system, beta-glucosides-specific IIC component.
    
 0.663
SDM42127.1
Phosphocarrier protein.
    
   0.551
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
   0.495
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.