STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM41994.1Sugar phosphate isomerase/epimerase. (332 aa)    
Predicted Functional Partners:
SDM41968.1
Predicted dehydrogenase.
 
 
  0.930
SDM41581.1
Myo-inositol catabolism protein IolH.
 
     0.773
SDM41349.1
Predicted dehydrogenase.
 
 
  0.748
SDM67396.1
Predicted dehydrogenase.
 
  0.729
SDM41692.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
 
  0.620
SDM67280.1
Xylose isomerase-like TIM barrel.
   
   0.566
iolG
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
 
  0.553
SDM41718.1
5-deoxyglucuronate isomerase.
 
    0.504
SDM41649.1
Inosose dehydratase.
  
   
 0.496
SDM41787.1
5-dehydro-2-deoxygluconokinase.
  
 
  0.450
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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