node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplI | rplM | SAMN04487766_101343 | SAMN04487766_102227 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplI | rplO | SAMN04487766_101343 | SAMN04487766_102239 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplI | rplQ | SAMN04487766_101343 | SAMN04487766_102231 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | LSU ribosomal protein L17P. | 0.999 |
rplI | rpmD | SAMN04487766_101343 | SAMN04487766_102240 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Large subunit ribosomal protein L30. | 0.999 |
rplI | rpsE | SAMN04487766_101343 | SAMN04487766_102241 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplI | rpsF | SAMN04487766_101343 | SAMN04487766_101346 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplI | rpsI | SAMN04487766_101343 | SAMN04487766_102226 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplI | rpsK | SAMN04487766_101343 | SAMN04487766_102233 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplI | rpsM | SAMN04487766_101343 | SAMN04487766_102234 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rplI | rpsR | SAMN04487766_101343 | SAMN04487766_101344 | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |
rplM | rplI | SAMN04487766_102227 | SAMN04487766_101343 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Large subunit ribosomal protein L9; Binds to the 23S rRNA. | 0.999 |
rplM | rplO | SAMN04487766_102227 | SAMN04487766_102239 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplM | rplQ | SAMN04487766_102227 | SAMN04487766_102231 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L17P. | 0.999 |
rplM | rpmD | SAMN04487766_102227 | SAMN04487766_102240 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Large subunit ribosomal protein L30. | 0.999 |
rplM | rpsE | SAMN04487766_102227 | SAMN04487766_102241 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
rplM | rpsF | SAMN04487766_102227 | SAMN04487766_101346 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplM | rpsI | SAMN04487766_102227 | SAMN04487766_102226 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsK | SAMN04487766_102227 | SAMN04487766_102233 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
rplM | rpsM | SAMN04487766_102227 | SAMN04487766_102234 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.999 |
rplM | rpsR | SAMN04487766_102227 | SAMN04487766_101344 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.999 |