STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM57385.1Cyanate permease. (431 aa)    
Predicted Functional Partners:
SDM57422.1
Protein N-acetyltransferase, RimJ/RimL family.
       0.642
SDM66269.1
L-rhamnose mutarotase.
 
  
 0.607
SDM57450.1
Peptidyl-dipeptidase Dcp.
       0.588
SDM57483.1
Hypothetical protein.
       0.467
SDM84400.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
  
 0.463
murB
UDP-N-acetylmuramate dehydrogenase; Cell wall formation.
 
     0.410
SDM65886.1
Cardiolipin synthase.
   
 
  0.400
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.