STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM68993.1LPXTG-motif cell wall anchor domain-containing protein/conserved repeat domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein. (545 aa)    
Predicted Functional Partners:
SDM68970.1
Sortase A.
 
  
 0.942
SDM69047.1
Hypothetical protein.
 
  
  0.829
SDM69019.1
Hypothetical protein.
 
  
 0.793
SDM58205.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.668
SDN04440.1
Hypothetical protein.
 
 
 0.629
SDM68915.1
PH domain-containing protein.
 
     0.556
SDN15429.1
Sortase A.
 
  
 0.556
SDM98927.1
Hypothetical protein.
  
     0.552
SDM56482.1
Protein of unknown function.
  
 
 0.497
SDM68943.1
PAP2 superfamily protein.
       0.488
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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