STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM65563.1PTS system, ascorbate-specific IIB component. (102 aa)    
Predicted Functional Partners:
SDM65587.1
PTS system, ascorbate-specific IIC component.
 
 
 0.999
SDM65535.1
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.982
SDM65687.1
Transcriptional antiterminator, BglG family.
 
 
 0.964
SDM65141.1
PTS system, ascorbate-specific IIA component.
 
 
 0.955
SDM65661.1
AAA domain-containing protein.
 
     0.895
SDN27487.1
PTS system, galactitol-specific IIC component.
 
 
 0.820
SDM42127.1
Phosphocarrier protein.
    
  0.783
SDM65614.1
Hypothetical protein.
       0.769
SDM65631.1
Fructose-bisphosphate aldolase, class II.
 
    0.716
SDN27543.1
PTS system, galactitol-specific IIA component.
 
 
 0.633
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.