STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM80947.1Transcriptional regulator, AbiEi antitoxin, Type IV TA system. (382 aa)    
Predicted Functional Partners:
SDM80924.1
Molybdopterin-guanine dinucleotide biosynthesis protein A.
 
     0.616
SDM65465.1
Hypothetical protein.
  
     0.606
SDM31303.1
Protein of unknown function.
  
     0.556
SDM86940.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
  
     0.506
SDM31328.1
VTC domain-containing protein.
  
     0.494
SDM71517.1
Hypothetical protein.
  
     0.488
SDM82839.1
AMIN domain-containing protein.
  
     0.477
SDM98092.1
Uncharacterized OsmC-related protein.
  
     0.469
SDM68943.1
PAP2 superfamily protein.
 
     0.437
SDM88131.1
ABC-2 type transport system permease protein.
  
     0.427
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.