STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM87195.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
SDM87222.1
5'-nucleotidase.
       0.778
SDM49147.1
YggT family protein.
  
     0.728
SDM71866.1
DNA polymerase III, delta subunit.
  
     0.724
SDM56505.1
Protein of unknown function.
  
     0.723
SDM75820.1
Protein of unknown function.
  
     0.715
SDM98726.1
Putative hydrolase.
  
     0.713
SDN30584.1
Protein of unknown function.
  
     0.697
SDM60762.1
MerR HTH family regulatory protein.
  
    0.685
SDM95325.1
Broad specificity phosphatase PhoE.
  
     0.683
SDN02989.1
Protein of unknown function.
  
     0.680
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.