STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM95265.1Succinate dehydrogenase / fumarate reductase cytochrome b subunit. (218 aa)    
Predicted Functional Partners:
SDM95236.1
Succinate dehydrogenase subunit A.
 
 
 0.999
SDM95209.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
 
 
 0.998
SDM42694.1
Succinate dehydrogenase subunit A.
 
 
 0.995
SDM42658.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
 
 
 0.992
SDM42725.1
Succinate dehydrogenase / fumarate reductase cytochrome b subunit.
  
  
 
0.943
SDM41660.1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
   
 
  0.905
SDM51699.1
Membrane protein involved in the export of O-antigen and teichoic acid.
   
    0.573
SDM92500.1
Polysaccharide transporter, PST family.
   
    0.573
SDM82295.1
Cytochrome d ubiquinol oxidase subunit I.
     
  0.499
SDM82322.1
Cytochrome d ubiquinol oxidase subunit II.
     
  0.499
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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