STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN07419.1Uncharacterized membrane protein SpoIIM, required for sporulation. (331 aa)    
Predicted Functional Partners:
SDN07446.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.941
SDN07388.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
 
  
 0.819
SDN07300.1
Protein of unknown function.
 
    0.783
SDN07334.1
Hypothetical protein.
 
    0.783
SDN07270.1
Membrane domain of glycerophosphoryl diester phosphodiesterase.
 
     0.772
SDN07364.1
MoxR-like ATPase.
 
    0.416
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.