Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDN12022.1 | SDN12047.1 | SAMN04487766_11421 | SAMN04487766_11422 | Basic membrane protein A. | Simple sugar transport system ATP-binding protein. | 0.995 |
SDN12022.1 | SDN12075.1 | SAMN04487766_11421 | SAMN04487766_11423 | Basic membrane protein A. | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
SDN12022.1 | SDN12105.1 | SAMN04487766_11421 | SAMN04487766_11424 | Basic membrane protein A. | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.996 |
SDN12022.1 | SDN12150.1 | SAMN04487766_11421 | SAMN04487766_11425 | Basic membrane protein A. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.689 |
SDN12022.1 | SDN12179.1 | SAMN04487766_11421 | SAMN04487766_11426 | Basic membrane protein A. | Thymidine phosphorylase. | 0.702 |
SDN12022.1 | SDN12211.1 | SAMN04487766_11421 | SAMN04487766_11427 | Basic membrane protein A. | Hypothetical protein. | 0.532 |
SDN12022.1 | deoC | SAMN04487766_11421 | SAMN04487766_11428 | Basic membrane protein A. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.538 |
SDN12047.1 | SDN12022.1 | SAMN04487766_11422 | SAMN04487766_11421 | Simple sugar transport system ATP-binding protein. | Basic membrane protein A. | 0.995 |
SDN12047.1 | SDN12075.1 | SAMN04487766_11422 | SAMN04487766_11423 | Simple sugar transport system ATP-binding protein. | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
SDN12047.1 | SDN12105.1 | SAMN04487766_11422 | SAMN04487766_11424 | Simple sugar transport system ATP-binding protein. | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
SDN12047.1 | SDN12150.1 | SAMN04487766_11422 | SAMN04487766_11425 | Simple sugar transport system ATP-binding protein. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.861 |
SDN12047.1 | SDN12179.1 | SAMN04487766_11422 | SAMN04487766_11426 | Simple sugar transport system ATP-binding protein. | Thymidine phosphorylase. | 0.848 |
SDN12047.1 | SDN12211.1 | SAMN04487766_11422 | SAMN04487766_11427 | Simple sugar transport system ATP-binding protein. | Hypothetical protein. | 0.786 |
SDN12047.1 | deoC | SAMN04487766_11422 | SAMN04487766_11428 | Simple sugar transport system ATP-binding protein. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.774 |
SDN12075.1 | SDN12022.1 | SAMN04487766_11423 | SAMN04487766_11421 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Basic membrane protein A. | 0.994 |
SDN12075.1 | SDN12047.1 | SAMN04487766_11423 | SAMN04487766_11422 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Simple sugar transport system ATP-binding protein. | 0.998 |
SDN12075.1 | SDN12105.1 | SAMN04487766_11423 | SAMN04487766_11424 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.998 |
SDN12075.1 | SDN12150.1 | SAMN04487766_11423 | SAMN04487766_11425 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.859 |
SDN12075.1 | SDN12179.1 | SAMN04487766_11423 | SAMN04487766_11426 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Thymidine phosphorylase. | 0.828 |
SDN12075.1 | SDN12211.1 | SAMN04487766_11423 | SAMN04487766_11427 | Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Hypothetical protein. | 0.786 |
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