STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN21968.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SDM39380.1
ABC-type lipoprotein export system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.970
SDN11853.1
Putative ABC transport system permease protein.
  
 
 0.799
SDM26897.1
Hypothetical protein.
 
   0.622
SDN21938.1
Hypothetical protein.
       0.610
SDM25486.1
Putative ABC transport system ATP-binding protein.
  
   0.541
SDM61010.1
Putative ABC transport system ATP-binding protein.
  
   0.541
SDM58699.1
Lipoprotein-releasing system ATP-binding protein.
  
   0.541
SDM86781.1
ABC transporter.
  
   0.541
SDN11875.1
Putative ABC transport system ATP-binding protein.
  
   0.541
SDN30712.1
ABC transporter.
  
   0.541
Your Current Organism:
Actinomyces ruminicola
NCBI taxonomy Id: 332524
Other names: A. ruminicola, Actinomyces ruminicola An et al. 2006 emend. Nouioui et al. 2018, CGMCC 1.5030, DSM 27982, JCM 13352, strain B71
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.